Welcome to PEMT’s documentation!

Release notes : https://github.com/Fraunhofer-ITMP/PEMT/releases

PEMT: A patent enrichment tool for drug discovery.

PEMT takes a two-step approach to collect patent documents relevant for drug discovery.

1. The chemical_extractor module extraction of chemicals that directly regulate (i.e. activation or inhibition) genes of interest based on functional or biochemical assays found within ChEMBL.

2. The patent_extractor module interlinking these chemicals to patent documents by systematically querying SureChEMBL, a patent database.

Contents:

• Welcome to PEMT’s documentation!
  • PEMT: A patent enrichment tool for drug discovery.
  • General info
  • Installation
  • Dependency
  • Issues
  • Disclaimer

• Command Line Interface
  • pemt
    • run-chemical-extractor
    • run-patent-extractor
    • run-pemt
• Developmental Guide
  • Core Module APIs
    • Gene Harmonizer
    • Chemical Extractor
    • Chemical Harmonizer
    • Patent Extractor

Indices and tables

• Index

• Module Index

• Search Page